| UniProt |
HXB1
|
| motif weight | 14.84013 |
| total sequences | 18 |
| data sources |
TRANSFAC20112:18
|
| motif logo |
|
| consensus | WGATGGATGG |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
4.5705 0.0 1.0157 9.2539
0.0 0.0 14.8401 0.0
14.8401 0.0 0.0 0.0
0.0 0.0 0.0 14.8401
0.0 0.0 9.2539 5.5862
0.0 0.0 14.8401 0.0
14.8401 0.0 0.0 0.0
0.0 0.0 0.0 14.8401
0.0 2.5392 12.3009 0.0
1.0157 1.0157 12.8088 0.0
|
| PPM | A C G T
0.308 0.0 0.0684 0.6236
0.0 0.0 1.0 0.0
1.0 0.0 0.0 0.0
0.0 0.0 0.0 1.0
0.0 0.0 0.6236 0.3764
0.0 0.0 1.0 0.0
1.0 0.0 0.0 0.0
0.0 0.0 0.0 1.0
0.0 0.1711 0.8289 0.0
0.0684 0.0684 0.8631 0.0
|
| PWM uniform | A C G T
0.1792 -1.8721 -0.9533 0.8173
-1.8721 -1.8721 1.2637 -1.8721
1.2637 -1.8721 -1.8721 -1.8721
-1.8721 -1.8721 -1.8721 1.2637
-1.8721 -1.8721 0.8173 0.3562
-1.8721 -1.8721 1.2637 -1.8721
1.2637 -1.8721 -1.8721 -1.8721
-1.8721 -1.8721 -1.8721 1.2637
-1.8721 -0.3107 1.085 -1.8721
-0.9533 -0.9533 1.1234 -1.8721
|
| PWM hg19 | A C G T
0.0458 -1.8721 -0.8393 0.674
-1.8721 -1.8721 1.4395 -1.8721
1.1163 -1.8721 -1.8721 -1.8721
-1.8721 -1.8721 -1.8721 1.1163
-1.8721 -1.8721 0.9889 0.2194
-1.8721 -1.8721 1.4395 -1.8721
1.1163 -1.8721 -1.8721 -1.8721
-1.8721 -1.8721 -1.8721 1.1163
-1.8721 -0.1634 1.2593 -1.8721
-1.0434 -0.8393 1.298 -1.8721
|
