| UniProt |
HNF1A
|
| motif weight | 174.0 |
| total sequences | 181 |
| data sources |
JASPAR:21 TRANSFAC20112:160 |
| motif logo |
|
| consensus | RGTTAWTvWTYdhYv |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
60.2881 5.1929 84.0871 24.4318
16.445 1.2925 151.0927 5.1699
1.2001 15.4294 2.031 155.3394
16.168 2.6772 0.0 155.1548
169.661 2.9542 0.6462 0.7386
130.1678 18.2112 6.0129 19.6082
15.7064 1.5694 1.4771 155.2471
69.7764 39.0413 34.4253 30.7569
97.4285 4.339 10.0749 62.1576
11.0905 3.9697 7.2932 151.6466
11.1828 30.1447 2.031 130.6415
96.6316 10.4442 33.456 33.4682
86.7388 49.2573 13.7799 24.2241
32.8803 99.0781 4.8929 37.1488
62.1249 64.1559 25.7583 21.961
|
| PPM | A C G T
0.3465 0.0298 0.4833 0.1404
0.0945 0.0074 0.8683 0.0297
0.0069 0.0887 0.0117 0.8928
0.0929 0.0154 0.0 0.8917
0.9751 0.017 0.0037 0.0042
0.7481 0.1047 0.0346 0.1127
0.0903 0.009 0.0085 0.8922
0.401 0.2244 0.1978 0.1768
0.5599 0.0249 0.0579 0.3572
0.0637 0.0228 0.0419 0.8715
0.0643 0.1732 0.0117 0.7508
0.5554 0.06 0.1923 0.1923
0.4985 0.2831 0.0792 0.1392
0.189 0.5694 0.0281 0.2135
0.357 0.3687 0.148 0.1262
|
| PWM uniform | A C G T
0.3183 -1.9328 0.6451 -0.5546
-0.9265 -2.8533 1.2244 -1.9364
-2.8897 -0.9854 -2.6018 1.2519
-0.9422 -2.424 -3.5475 1.2507
1.3394 -2.3565 -3.1414 -3.0948
1.0767 -0.8315 -1.8137 -0.7623
-0.969 -2.7514 -2.7843 1.2513
0.4616 -0.1049 -0.2264 -0.3348
0.7903 -2.0741 -1.3715 0.3482
-1.2859 -2.1419 -1.6522 1.228
-1.2785 -0.3541 -2.6018 1.0803
0.7822 -1.3395 -0.2539 -0.2536
0.6757 0.1209 -1.0893 -0.5628
-0.2706 0.8069 -1.9802 -0.1529
0.3477 0.3792 -0.5044 -0.6556
|
| PWM hg19 | A C G T
0.1672 -1.7836 0.8256 -0.701
-1.069 -2.7575 1.406 -2.0582
-2.9613 -0.8154 -2.4859 1.0986
-1.0846 -2.2968 -3.5475 1.0974
1.186 -2.2256 -3.0765 -3.1484
0.9237 -0.6596 -1.6607 -0.9067
-1.111 -2.6469 -2.6824 1.098
0.31 0.0728 -0.0494 -0.4827
0.6378 -1.9301 -1.2076 0.197
-1.4233 -2.0008 -1.4946 1.0748
-1.416 -0.1779 -2.4859 0.9273
0.6297 -1.175 -0.0771 -0.402
0.5235 0.2997 -0.9207 -0.709
-0.419 0.9877 -1.8327 -0.302
0.1965 0.559 -0.3293 -0.8011
|