back HNF1A_f1 HOCOMOCO-build9-MAR2012


UniProt HNF1A
motif weight174.0
total sequences181
data sources JASPAR:21
TRANSFAC20112:160
motif logo
consensusRGTTAWTvWTYdhYv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   60.2881     5.1929    84.0871    24.4318 
    16.445     1.2925   151.0927     5.1699 
    1.2001    15.4294      2.031   155.3394 
    16.168     2.6772        0.0   155.1548 
   169.661     2.9542     0.6462     0.7386 
  130.1678    18.2112     6.0129    19.6082 
   15.7064     1.5694     1.4771   155.2471 
   69.7764    39.0413    34.4253    30.7569 
   97.4285      4.339    10.0749    62.1576 
   11.0905     3.9697     7.2932   151.6466 
   11.1828    30.1447      2.031   130.6415 
   96.6316    10.4442     33.456    33.4682 
   86.7388    49.2573    13.7799    24.2241 
   32.8803    99.0781     4.8929    37.1488 
   62.1249    64.1559    25.7583     21.961 
PPM
     A          C          G          T    
    0.3465     0.0298     0.4833     0.1404 
    0.0945     0.0074     0.8683     0.0297 
    0.0069     0.0887     0.0117     0.8928 
    0.0929     0.0154        0.0     0.8917 
    0.9751      0.017     0.0037     0.0042 
    0.7481     0.1047     0.0346     0.1127 
    0.0903      0.009     0.0085     0.8922 
     0.401     0.2244     0.1978     0.1768 
    0.5599     0.0249     0.0579     0.3572 
    0.0637     0.0228     0.0419     0.8715 
    0.0643     0.1732     0.0117     0.7508 
    0.5554       0.06     0.1923     0.1923 
    0.4985     0.2831     0.0792     0.1392 
     0.189     0.5694     0.0281     0.2135 
     0.357     0.3687      0.148     0.1262 
PWM uniform
     A          C          G          T    
    0.3183    -1.9328     0.6451    -0.5546 
   -0.9265    -2.8533     1.2244    -1.9364 
   -2.8897    -0.9854    -2.6018     1.2519 
   -0.9422     -2.424    -3.5475     1.2507 
    1.3394    -2.3565    -3.1414    -3.0948 
    1.0767    -0.8315    -1.8137    -0.7623 
    -0.969    -2.7514    -2.7843     1.2513 
    0.4616    -0.1049    -0.2264    -0.3348 
    0.7903    -2.0741    -1.3715     0.3482 
   -1.2859    -2.1419    -1.6522      1.228 
   -1.2785    -0.3541    -2.6018     1.0803 
    0.7822    -1.3395    -0.2539    -0.2536 
    0.6757     0.1209    -1.0893    -0.5628 
   -0.2706     0.8069    -1.9802    -0.1529 
    0.3477     0.3792    -0.5044    -0.6556 
PWM hg19
     A          C          G          T    
    0.1672    -1.7836     0.8256     -0.701 
    -1.069    -2.7575      1.406    -2.0582 
   -2.9613    -0.8154    -2.4859     1.0986 
   -1.0846    -2.2968    -3.5475     1.0974 
     1.186    -2.2256    -3.0765    -3.1484 
    0.9237    -0.6596    -1.6607    -0.9067 
    -1.111    -2.6469    -2.6824      1.098 
      0.31     0.0728    -0.0494    -0.4827 
    0.6378    -1.9301    -1.2076      0.197 
   -1.4233    -2.0008    -1.4946     1.0748 
    -1.416    -0.1779    -2.4859     0.9273 
    0.6297     -1.175    -0.0771     -0.402 
    0.5235     0.2997    -0.9207     -0.709 
    -0.419     0.9877    -1.8327     -0.302 
    0.1965      0.559    -0.3293    -0.8011