| UniProt |
HMGA2
|
| motif weight | 75.47586 |
| total sequences | 81 |
| data sources |
TRANSFAC20112:81
|
| motif logo |
|
| consensus | AATAWhSSSSAATAT |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
71.7517 1.2414 1.2414 1.2414
54.6207 0.0 0.0 20.8552
11.9172 0.0 0.0 63.5586
44.6897 0.0 0.0 30.7862
39.7241 1.9862 0.9931 32.7724
12.9103 20.8552 8.9379 32.7724
0.0 41.7103 29.7931 3.9724
1.9862 24.8276 46.6759 1.9862
0.0 37.7379 32.7724 4.9655
1.9862 31.7793 40.7172 0.9931
71.5034 0.0 2.9793 0.9931
59.5862 0.9931 0.0 14.8966
1.9862 0.9931 0.0 72.4966
59.5862 0.0 0.9931 14.8966
1.4897 1.4897 1.4897 71.0069
|
| PPM | A C G T
0.9507 0.0164 0.0164 0.0164
0.7237 0.0 0.0 0.2763
0.1579 0.0 0.0 0.8421
0.5921 0.0 0.0 0.4079
0.5263 0.0263 0.0132 0.4342
0.1711 0.2763 0.1184 0.4342
0.0 0.5526 0.3947 0.0526
0.0263 0.3289 0.6184 0.0263
0.0 0.5 0.4342 0.0658
0.0263 0.4211 0.5395 0.0132
0.9474 0.0 0.0395 0.0132
0.7895 0.0132 0.0 0.1974
0.0263 0.0132 0.0 0.9605
0.7895 0.0 0.0132 0.1974
0.0197 0.0197 0.0197 0.9408
|
| PWM uniform | A C G T
1.2949 -2.1507 -2.1507 -2.1507
1.0268 -2.9154 -2.9154 0.0949
-0.4284 -2.9154 -2.9154 1.1756
0.8304 -2.9154 -2.9154 0.4684
0.7156 -1.8725 -2.2637 0.5288
-0.3548 0.0949 -0.6888 0.5288
-2.9154 0.7631 0.4367 -1.3732
-1.8725 0.2613 0.8729 -1.8725
-2.9154 0.6657 0.5288 -1.1938
-1.8725 0.499 0.7396 -2.2637
1.2915 -2.9154 -1.592 -2.2637
1.1122 -2.2637 -2.9154 -0.222
-1.8725 -2.2637 -2.9154 1.3051
1.1122 -2.9154 -2.2637 -0.222
-2.0491 -2.0491 -2.0491 1.2847
|
| PWM hg19 | A C G T
1.1428 -2.0487 -2.0487 -2.2303
0.8754 -2.9154 -2.9154 -0.0515
-0.5693 -2.9154 -2.9154 1.0237
0.6797 -2.9154 -2.9154 0.3193
0.5653 -1.7502 -2.1719 0.3795
-0.4966 0.2697 -0.5239 0.3795
-2.9154 0.9419 0.6139 -1.4927
-1.9699 0.4374 1.0521 -1.9699
-2.9154 0.844 0.7065 -1.3189
-1.9699 0.6766 0.9183 -2.3348
1.1394 -2.9154 -1.4545 -2.3348
0.9605 -2.1719 -2.9154 -0.3655
-1.9699 -2.1719 -2.9154 1.1529
0.9605 -2.9154 -2.1719 -0.3655
-2.1358 -1.939 -1.939 1.1325
|
