| UniProt |
HMGA1
|
| motif weight | 94.29046 |
| total sequences | 104 |
| data sources |
TRANSFAC20112:104
|
| motif logo |
|
| consensus | nWATTWd |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
24.5705 17.0187 33.417 19.2842
29.8838 7.8755 0.0 56.5311
79.9419 3.7759 0.0 10.5726
0.0 0.0 0.0 94.2905
1.9419 0.971 0.0 91.3776
22.5477 5.8257 8.8465 57.0705
19.3382 10.5996 11.0311 53.3216
|
| PPM | A C G T
0.2606 0.1805 0.3544 0.2045
0.3169 0.0835 0.0 0.5995
0.8478 0.04 0.0 0.1121
0.0 0.0 0.0 1.0
0.0206 0.0103 0.0 0.9691
0.2391 0.0618 0.0938 0.6053
0.2051 0.1124 0.117 0.5655
|
| PWM uniform | A C G T
0.0396 -0.3082 0.3353 -0.1906
0.2275 -1.0086 -3.0791 0.8475
1.1882 -1.6154 -3.0791 -0.7468
-3.0791 -3.0791 -3.0791 1.3512
-2.0827 -2.4617 -3.0791 1.3202
-0.0424 -1.2667 -0.9063 0.8568
-0.188 -0.7445 -0.7084 0.7903
|
| PWM hg19 | A C G T
-0.1077 -0.1357 0.5129 -0.336
0.0789 -0.8469 -3.0791 0.6962
1.0359 -1.4718 -3.0791 -0.8854
-3.0791 -3.0791 -3.0791 1.1985
-2.1775 -2.3731 -3.0791 1.1676
-0.189 -1.1113 -0.7425 0.7054
-0.3334 -0.5778 -0.5411 0.6391
|
