back HIF1A_si HOCOMOCO-build9-MAR2012


UniProt HIF1A
motif weight498.91705
total sequences597
data sources HRECURATED:46,363
JASPAR:104
TRANSFAC20112:84
motif logo
consensusvbvbACGTGMvb
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   49.3507   150.7684   253.0951    45.7028 
   55.3967   177.5259   173.3954    92.5991 
   67.5528   181.6498   232.7034    17.0111 
    37.033    99.2087   107.4666   255.2087 
  423.9837     0.5147    72.8747      1.544 
       0.0   498.4024        0.0     0.5147 
       0.0     1.0294    497.373     0.5147 
       0.0        0.0        0.0    498.917 
       0.0        0.0    498.917        0.0 
  103.8896   294.7619    51.7717    48.4938 
   67.9808   131.6787   232.3438    66.9137 
   31.2226   153.9486   195.2119   118.5339 
PPM
     A          C          G          T    
    0.0989     0.3022     0.5073     0.0916 
     0.111     0.3558     0.3475     0.1856 
    0.1354     0.3641     0.4664     0.0341 
    0.0742     0.1988     0.2154     0.5115 
    0.8498      0.001     0.1461     0.0031 
       0.0      0.999        0.0      0.001 
       0.0     0.0021     0.9969      0.001 
       0.0        0.0        0.0        1.0 
       0.0        0.0        1.0        0.0 
    0.2082     0.5908     0.1038     0.0972 
    0.1363     0.2639     0.4657     0.1341 
    0.0626     0.3086     0.3913     0.2376 
PWM uniform
     A          C          G          T    
   -0.9086     0.1875     0.7014    -0.9829 
   -0.7964     0.3493      0.326    -0.2936 
   -0.6029     0.3721     0.6179    -1.9173 
   -1.1856    -0.2258     -0.147     0.7096 
    1.2148     -4.112    -0.5287     -3.708 
   -4.3983      1.376    -4.3983     -4.112 
   -4.3983    -3.8898     1.3739     -4.112 
   -4.3983    -4.3983    -4.3983      1.377 
   -4.3983    -4.3983      1.377    -4.3983 
   -0.1804     0.8529    -0.8621    -0.9256 
   -0.5967     0.0536     0.6164    -0.6122 
   -1.3488     0.2081     0.4435    -0.0503 
PWM hg19
     A          C          G          T    
   -1.0582     0.3688     0.8834    -1.1321 
   -0.9465     0.5309     0.5075    -0.4455 
   -0.7538     0.5537     0.7998    -2.0581 
   -1.3336    -0.0453     0.0337      0.556 
    1.0608    -4.0633    -0.3492    -3.7822 
   -4.3983     1.5585    -4.3983    -4.1484 
   -4.3983    -3.8128     1.5565    -4.1484 
   -4.3983    -4.3983    -4.3983     1.2229 
   -4.3983    -4.3983     1.5595    -4.3983 
   -0.3326     1.0351     -0.684     -1.075 
   -0.7476     0.2347     0.7983     -0.763 
   -1.4956     0.3895     0.6252    -0.2028