| UniProt |
HAND1
|
| motif weight | 26.0 |
| total sequences | 29 |
| data sources |
JASPAR:29
|
| motif logo |
|
| consensus | dnRTCTGGhWdh |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
4.5 0.5 16.5 4.5
1.0 9.0 9.0 7.0
10.0 0.0 15.0 1.0
0.0 2.0 1.0 23.0
0.0 25.0 1.0 0.0
0.0 0.0 0.0 26.0
0.0 0.0 26.0 0.0
0.0 2.0 23.0 1.0
9.0 11.0 1.0 5.0
13.0 1.0 2.0 10.0
5.0 3.0 4.0 14.0
4.25 5.25 3.25 13.25
|
| PPM | A C G T
0.1731 0.0192 0.6346 0.1731
0.0385 0.3462 0.3462 0.2692
0.3846 0.0 0.5769 0.0385
0.0 0.0769 0.0385 0.8846
0.0 0.9615 0.0385 0.0
0.0 0.0 0.0 1.0
0.0 0.0 1.0 0.0
0.0 0.0769 0.8846 0.0385
0.3462 0.4231 0.0385 0.1923
0.5 0.0385 0.0769 0.3846
0.1923 0.1154 0.1538 0.5385
0.1635 0.2019 0.125 0.5096
|
| PWM uniform | A C G T
-0.3194 -1.7164 0.8617 -0.3194
-1.394 0.294 0.294 0.0661
0.391 -2.195 0.7711 -1.394
-2.195 -0.9551 -1.394 1.1804
-2.195 1.2611 -1.394 -2.195
-2.195 -2.195 -2.195 1.2991
-2.195 -2.195 1.2991 -2.195
-2.195 -0.9551 1.1804 -1.394
0.294 0.4795 -1.394 -0.2295
0.6359 -1.394 -0.9551 0.391
-0.2295 -0.651 -0.4182 0.7057
-0.3676 -0.1874 -0.5876 0.6538
|
| PWM hg19 | A C G T
-0.4488 -1.6428 1.0368 -0.4488
-1.4763 0.4631 0.4631 -0.0713
0.2489 -2.195 0.9455 -1.4763
-2.195 -0.8216 -1.2891 1.0315
-2.195 1.4388 -1.2891 -2.195
-2.195 -2.195 -2.195 1.1495
-2.195 -2.195 1.477 -2.195
-2.195 -0.8216 1.3577 -1.4763
0.1531 0.6509 -1.2891 -0.361
0.491 -1.2891 -0.8216 0.2489
-0.361 -0.5044 -0.2639 0.5602
-0.4957 -0.0271 -0.4386 0.5088
|
