back GCR_do HOCOMOCO-build9-MAR2012

UniProt	GCR
motif weight	4122.19573
total sequences	4268
data sources	HUDSONALPHACHIPSEQV2:2000 JASPAR:9 TRANSFAC20112:142 YALECHIPSEQV3:2117
motif logo
consensus	vRGRASAdnvhRdnSndd
small-BiSMark	hg19 PWM
small-BiSMark	uniform PWM
thresholds	hg19 PWM
thresholds	uniform PWM
WPCM	A C G T 1129.5917 904.2366 1807.3629 281.0046 2413.167 43.7245 1641.0542 24.25 521.3538 80.9655 3467.3372 52.5392 2816.4674 284.1861 822.1656 199.3766 3847.6976 50.0964 111.1345 113.2673 240.9293 2963.207 832.4994 85.56 3338.714 113.9918 367.2642 302.2257 791.5443 485.0852 1594.9309 1250.6355 1520.1402 779.2286 801.1517 1021.6753 1224.3423 1299.9942 1230.1571 367.7021 1299.2735 580.1305 366.1388 1876.653 461.2254 246.0138 3070.1136 344.843 588.5894 345.9526 957.8891 2229.7646 813.4649 1213.1927 906.9345 1188.6037 408.0327 2749.1018 559.1304 405.9308 1057.1562 1403.7538 507.7708 1153.5149 1371.743 427.6919 1375.5279 947.233 1130.4704 566.3177 1699.4526 725.955
PPM	A C G T 0.274 0.2194 0.4384 0.0682 0.5854 0.0106 0.3981 0.0059 0.1265 0.0196 0.8411 0.0127 0.6832 0.0689 0.1994 0.0484 0.9334 0.0122 0.027 0.0275 0.0584 0.7188 0.202 0.0208 0.8099 0.0277 0.0891 0.0733 0.192 0.1177 0.3869 0.3034 0.3688 0.189 0.1944 0.2478 0.297 0.3154 0.2984 0.0892 0.3152 0.1407 0.0888 0.4553 0.1119 0.0597 0.7448 0.0837 0.1428 0.0839 0.2324 0.5409 0.1973 0.2943 0.22 0.2883 0.099 0.6669 0.1356 0.0985 0.2565 0.3405 0.1232 0.2798 0.3328 0.1038 0.3337 0.2298 0.2742 0.1374 0.4123 0.1761
PWM uniform	A C G T 0.0916 -0.1305 0.5609 -1.2941 0.8497 -3.1155 0.4645 -3.6691 -0.6795 -2.5205 1.2119 -2.9395 1.0041 -1.2829 -0.2254 -1.6343 1.3159 -2.9852 -2.2106 -2.1919 -1.4468 1.0549 -0.2129 -2.4666 1.1741 -2.1856 -1.0281 -1.2218 -0.2633 -0.7513 0.436 0.1932 0.3881 -0.2789 -0.2512 -0.0086 0.172 0.2319 0.1767 -1.0269 0.2313 -0.573 -1.0312 0.5985 -0.8015 -1.4261 1.0903 -1.0908 -0.5586 -1.0876 -0.073 0.7707 -0.236 0.1629 -0.1275 0.1424 -0.9234 0.9799 -0.6098 -0.9286 0.0254 0.3085 -0.7057 0.1125 0.2855 -0.8766 0.2882 -0.0841 0.0924 -0.597 0.4994 -0.3495
PWM hg19	A C G T -0.0628 0.0522 0.7438 -1.4475 0.6952 -2.9401 0.6473 -3.8106 -0.8334 -2.3416 1.3948 -3.0878 0.8496 -1.1011 -0.0428 -1.7872 1.1613 -2.8089 -2.0306 -2.3436 -1.6 1.2378 -0.0303 -2.6173 1.0195 -2.0056 -0.846 -1.3753 -0.4175 -0.5689 0.6188 0.0388 0.2336 -0.0963 -0.0686 -0.163 0.0176 0.4146 0.3595 -1.1807 0.0769 -0.3906 -0.8491 0.444 -0.9554 -1.2444 1.2732 -1.2444 -0.7127 -0.9055 0.1097 0.6162 -0.3902 0.3456 0.0552 -0.0119 -1.0772 1.1628 -0.4274 -1.0824 -0.1289 0.4913 -0.5234 -0.0419 0.1311 -0.6944 0.471 -0.2384 -0.062 -0.4146 0.6823 -0.5037