| UniProt |
GCM1
|
| motif weight | 12.0 |
| total sequences | 12 |
| data sources |
TRANSFAC20112:12
|
| motif logo |
|
| consensus | hWnATGMKGGYhbb |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
3.7778 4.2222 1.0 3.0
5.2222 1.0 0.7778 5.0
3.0 4.1111 2.8889 2.0
9.8889 2.1111 0.0 0.0
0.0 0.0 0.0 12.0
0.0 0.0 12.0 0.0
2.1111 7.8889 0.0 2.0
0.0 1.1111 7.0 3.8889
0.0 0.0 12.0 0.0
0.0 0.0 12.0 0.0
1.0 4.0 0.7778 6.2222
4.7778 3.1111 2.0 2.1111
1.0 3.8889 3.1111 4.0
1.0 2.2222 4.0 4.7778
|
| PPM | A C G T
0.3148 0.3519 0.0833 0.25
0.4352 0.0833 0.0648 0.4167
0.25 0.3426 0.2407 0.1667
0.8241 0.1759 0.0 0.0
0.0 0.0 0.0 1.0
0.0 0.0 1.0 0.0
0.1759 0.6574 0.0 0.1667
0.0 0.0926 0.5833 0.3241
0.0 0.0 1.0 0.0
0.0 0.0 1.0 0.0
0.0833 0.3333 0.0648 0.5185
0.3981 0.2593 0.1667 0.1759
0.0833 0.3241 0.2593 0.3333
0.0833 0.1852 0.3333 0.3981
|
| PWM uniform | A C G T
0.1946 0.2908 -0.8036 0.0
0.4785 -0.8036 -0.9511 0.4397
0.0 0.2676 -0.0312 -0.3232
1.0655 -0.2817 -1.7629 -1.7629
-1.7629 -1.7629 -1.7629 1.2486
-1.7629 -1.7629 1.2486 -1.7629
-0.2817 0.8544 -1.7629 -0.3232
-1.7629 -0.7373 0.7441 0.2195
-1.7629 -1.7629 1.2486 -1.7629
-1.7629 -1.7629 1.2486 -1.7629
-0.8036 0.2438 -0.9511 0.6365
0.3994 0.0302 -0.3232 -0.2817
-0.8036 0.2195 0.0302 0.2438
-0.8036 -0.2418 0.2438 0.3994
|
| PWM hg19 | A C G T
0.0633 0.4522 -0.6868 -0.1264
0.3415 -0.6868 -0.8452 0.3034
-0.1264 0.4284 0.1218 -0.439
0.9207 -0.1374 -1.7629 -1.7629
-1.7629 -1.7629 -1.7629 1.1021
-1.7629 -1.7629 1.4233 -1.7629
-0.399 1.0252 -1.7629 -0.439
-1.7629 -0.6162 0.9134 0.0876
-1.7629 -1.7629 1.4233 -1.7629
-1.7629 -1.7629 1.4233 -1.7629
-0.8962 0.4041 -0.8452 0.4969
0.2638 0.185 -0.1806 -0.399
-0.8962 0.3792 0.185 0.1114
-0.8962 -0.096 0.4041 0.2638
|
