back GCM1_f1 HOCOMOCO-build9-MAR2012


UniProt GCM1
motif weight12.0
total sequences12
data sources TRANSFAC20112:12
motif logo
consensushWnATGMKGGYhbb
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    3.7778     4.2222        1.0        3.0 
    5.2222        1.0     0.7778        5.0 
       3.0     4.1111     2.8889        2.0 
    9.8889     2.1111        0.0        0.0 
       0.0        0.0        0.0       12.0 
       0.0        0.0       12.0        0.0 
    2.1111     7.8889        0.0        2.0 
       0.0     1.1111        7.0     3.8889 
       0.0        0.0       12.0        0.0 
       0.0        0.0       12.0        0.0 
       1.0        4.0     0.7778     6.2222 
    4.7778     3.1111        2.0     2.1111 
       1.0     3.8889     3.1111        4.0 
       1.0     2.2222        4.0     4.7778 
PPM
     A          C          G          T    
    0.3148     0.3519     0.0833       0.25 
    0.4352     0.0833     0.0648     0.4167 
      0.25     0.3426     0.2407     0.1667 
    0.8241     0.1759        0.0        0.0 
       0.0        0.0        0.0        1.0 
       0.0        0.0        1.0        0.0 
    0.1759     0.6574        0.0     0.1667 
       0.0     0.0926     0.5833     0.3241 
       0.0        0.0        1.0        0.0 
       0.0        0.0        1.0        0.0 
    0.0833     0.3333     0.0648     0.5185 
    0.3981     0.2593     0.1667     0.1759 
    0.0833     0.3241     0.2593     0.3333 
    0.0833     0.1852     0.3333     0.3981 
PWM uniform
     A          C          G          T    
    0.1946     0.2908    -0.8036        0.0 
    0.4785    -0.8036    -0.9511     0.4397 
       0.0     0.2676    -0.0312    -0.3232 
    1.0655    -0.2817    -1.7629    -1.7629 
   -1.7629    -1.7629    -1.7629     1.2486 
   -1.7629    -1.7629     1.2486    -1.7629 
   -0.2817     0.8544    -1.7629    -0.3232 
   -1.7629    -0.7373     0.7441     0.2195 
   -1.7629    -1.7629     1.2486    -1.7629 
   -1.7629    -1.7629     1.2486    -1.7629 
   -0.8036     0.2438    -0.9511     0.6365 
    0.3994     0.0302    -0.3232    -0.2817 
   -0.8036     0.2195     0.0302     0.2438 
   -0.8036    -0.2418     0.2438     0.3994 
PWM hg19
     A          C          G          T    
    0.0633     0.4522    -0.6868    -0.1264 
    0.3415    -0.6868    -0.8452     0.3034 
   -0.1264     0.4284     0.1218     -0.439 
    0.9207    -0.1374    -1.7629    -1.7629 
   -1.7629    -1.7629    -1.7629     1.1021 
   -1.7629    -1.7629     1.4233    -1.7629 
    -0.399     1.0252    -1.7629     -0.439 
   -1.7629    -0.6162     0.9134     0.0876 
   -1.7629    -1.7629     1.4233    -1.7629 
   -1.7629    -1.7629     1.4233    -1.7629 
   -0.8962     0.4041    -0.8452     0.4969 
    0.2638      0.185    -0.1806     -0.399 
   -0.8962     0.3792      0.185     0.1114 
   -0.8962     -0.096     0.4041     0.2638