| UniProt |
GABPA
|
| motif weight | 2749.95255 |
| total sequences | 3042 |
| data sources |
HUDSONALPHACHIPSEQV2:2000 JASPAR:993 TRANSFAC20112:49 |
| motif logo |
|
| consensus | vvvCCGGAAGYSv |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
615.2573 697.0699 1261.1903 176.4351
996.493 805.1879 693.7696 254.5021
1106.9888 508.1944 1029.833 104.9363
143.7121 2086.4279 518.3751 1.4374
362.9541 2369.4739 17.237 0.2875
0.0 0.0 2749.9525 0.0
0.0 0.0 2749.9525 0.0
2748.2568 1.6958 0.0 0.0
2726.6484 1.1499 1.1499 21.0043
202.057 28.7994 2518.8087 0.2875
172.9289 521.124 106.382 1949.5176
398.1679 424.2094 1706.4024 221.1728
764.2588 675.0884 1066.5414 244.064
|
| PPM | A C G T
0.2237 0.2535 0.4586 0.0642
0.3624 0.2928 0.2523 0.0925
0.4025 0.1848 0.3745 0.0382
0.0523 0.7587 0.1885 0.0005
0.132 0.8616 0.0063 0.0001
0.0 0.0 1.0 0.0
0.0 0.0 1.0 0.0
0.9994 0.0006 0.0 0.0
0.9915 0.0004 0.0004 0.0076
0.0735 0.0105 0.9159 0.0001
0.0629 0.1895 0.0387 0.7089
0.1448 0.1543 0.6205 0.0804
0.2779 0.2455 0.3878 0.0888
|
| PWM uniform | A C G T
-0.1107 0.0138 0.6055 -1.3518
0.3703 0.1576 0.0091 -0.9889
0.4753 -0.3012 0.4032 -1.8639
-1.5544 1.1082 -0.2814 -5.3071
-0.6362 1.2353 -3.5801 -5.7173
-5.8529 -5.8529 1.3841 -5.8529
-5.8529 -5.8529 1.3841 -5.8529
1.3835 -5.2342 -5.8529 -5.8529
1.3756 -5.395 -5.395 -3.4011
-1.2176 -3.1091 1.2964 -5.7173
-1.3717 -0.2761 -1.8504 1.0404
-0.5441 -0.481 0.9074 -1.1281
0.1056 -0.0181 0.4381 -1.0304
|
| PWM hg19 | A C G T
-0.2648 0.1964 0.7882 -1.5046
0.216 0.3402 0.1916 -1.1422
0.3209 -0.1188 0.5859 -2.0154
-1.7068 1.2911 -0.099 -5.3693
-0.79 1.4182 -3.4145 -5.7357
-5.8529 -5.8529 1.5671 -5.8529
-5.8529 -5.8529 1.5671 -5.8529
1.229 -5.1456 -5.8529 -5.8529
1.2211 -5.3238 -5.3238 -3.5415
-1.3707 -2.9369 1.4793 -5.7357
-1.5244 -0.0937 -1.6705 0.8859
-0.6979 -0.2988 1.0902 -1.2812
-0.0487 0.1644 0.6208 -1.1837
|