UniProt |
GABPA
|
motif weight | 2749.95255 |
total sequences | 3042 |
data sources |
HUDSONALPHACHIPSEQV2:2000 JASPAR:993 TRANSFAC20112:49 |
motif logo | |
consensus | vvvCCGGAAGYSv |
small-BiSMark | hg19 PWM |
small-BiSMark | uniform PWM |
thresholds | hg19 PWM |
thresholds | uniform PWM |
WPCM | A C G T 615.2573 697.0699 1261.1903 176.4351 996.493 805.1879 693.7696 254.5021 1106.9888 508.1944 1029.833 104.9363 143.7121 2086.4279 518.3751 1.4374 362.9541 2369.4739 17.237 0.2875 0.0 0.0 2749.9525 0.0 0.0 0.0 2749.9525 0.0 2748.2568 1.6958 0.0 0.0 2726.6484 1.1499 1.1499 21.0043 202.057 28.7994 2518.8087 0.2875 172.9289 521.124 106.382 1949.5176 398.1679 424.2094 1706.4024 221.1728 764.2588 675.0884 1066.5414 244.064 |
PPM | A C G T 0.2237 0.2535 0.4586 0.0642 0.3624 0.2928 0.2523 0.0925 0.4025 0.1848 0.3745 0.0382 0.0523 0.7587 0.1885 0.0005 0.132 0.8616 0.0063 0.0001 0.0 0.0 1.0 0.0 0.0 0.0 1.0 0.0 0.9994 0.0006 0.0 0.0 0.9915 0.0004 0.0004 0.0076 0.0735 0.0105 0.9159 0.0001 0.0629 0.1895 0.0387 0.7089 0.1448 0.1543 0.6205 0.0804 0.2779 0.2455 0.3878 0.0888 |
PWM uniform | A C G T -0.1107 0.0138 0.6055 -1.3518 0.3703 0.1576 0.0091 -0.9889 0.4753 -0.3012 0.4032 -1.8639 -1.5544 1.1082 -0.2814 -5.3071 -0.6362 1.2353 -3.5801 -5.7173 -5.8529 -5.8529 1.3841 -5.8529 -5.8529 -5.8529 1.3841 -5.8529 1.3835 -5.2342 -5.8529 -5.8529 1.3756 -5.395 -5.395 -3.4011 -1.2176 -3.1091 1.2964 -5.7173 -1.3717 -0.2761 -1.8504 1.0404 -0.5441 -0.481 0.9074 -1.1281 0.1056 -0.0181 0.4381 -1.0304 |
PWM hg19 | A C G T -0.2648 0.1964 0.7882 -1.5046 0.216 0.3402 0.1916 -1.1422 0.3209 -0.1188 0.5859 -2.0154 -1.7068 1.2911 -0.099 -5.3693 -0.79 1.4182 -3.4145 -5.7357 -5.8529 -5.8529 1.5671 -5.8529 -5.8529 -5.8529 1.5671 -5.8529 1.229 -5.1456 -5.8529 -5.8529 1.2211 -5.3238 -5.3238 -3.5415 -1.3707 -2.9369 1.4793 -5.7357 -1.5244 -0.0937 -1.6705 0.8859 -0.6979 -0.2988 1.0902 -1.2812 -0.0487 0.1644 0.6208 -1.1837 |