| UniProt |
GABP1
GABP2
|
| motif weight | 36.0 |
| total sequences | 36 |
| data sources |
TRANSFAC20112:36
|
| motif logo |
|
| consensus | SCGGAAGbdv |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
6.3987 20.8704 7.7143 1.0166
9.0897 26.9103 0.0 0.0
0.9568 0.0 35.0432 0.0
0.0 0.0 36.0 0.0
35.0432 0.0 0.9568 0.0
33.9668 0.0 0.0 2.0332
7.6545 0.0 28.3455 0.0
3.588 3.8272 8.4917 20.093
5.5017 4.7841 19.7342 5.9801
12.6179 8.9103 12.4983 1.9734
|
| PPM | A C G T
0.1777 0.5797 0.2143 0.0282
0.2525 0.7475 0.0 0.0
0.0266 0.0 0.9734 0.0
0.0 0.0 1.0 0.0
0.9734 0.0 0.0266 0.0
0.9435 0.0 0.0 0.0565
0.2126 0.0 0.7874 0.0
0.0997 0.1063 0.2359 0.5581
0.1528 0.1329 0.5482 0.1661
0.3505 0.2475 0.3472 0.0548
|
| PWM uniform | A C G T
-0.305 0.7882 -0.1392 -1.6437
0.009 1.0331 -2.4021 -2.4021
-1.6755 -2.4021 1.2897 -2.4021
-2.4021 -2.4021 1.316 -2.4021
1.2897 -2.4021 -1.6755 -2.4021
1.2593 -2.4021 -2.4021 -1.2174
-0.1461 -2.4021 1.0835 -2.4021
-0.7916 -0.7396 -0.0527 0.7519
-0.4362 -0.5552 0.7346 -0.3641
0.3116 -0.0091 0.3027 -1.238
|
| PWM hg19 | A C G T
-0.4393 0.9644 0.0263 -1.7229
-0.1307 1.2108 -2.4021 -2.4021
-1.7524 -2.4021 1.4686 -2.4021
-2.4021 -2.4021 1.4949 -2.4021
1.1392 -2.4021 -1.5768 -2.4021
1.1089 -2.4021 -2.4021 -1.3222
-0.2834 -2.4021 1.2614 -2.4021
-0.9134 -0.5889 0.1142 0.6043
-0.5677 -0.3989 0.9104 -0.4972
0.168 0.1585 0.4745 -1.3418
|
