| UniProt |
FOXD1
|
| motif weight | 22.0 |
| total sequences | 22 |
| data sources |
JASPAR:20 TRANSFAC20112:2 |
| motif logo |
|
| consensus | nhhTSTTTAChWhvR |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
2.627 12.5023 2.627 4.2437
8.3166 2.425 1.6166 9.6418
7.7957 3.7541 2.1375 8.3126
0.8083 0.8083 1.6166 18.7667
0.8083 5.3668 15.0165 0.8083
0.8083 0.8083 0.8083 19.575
0.0 0.0 0.8083 21.1917
0.0 0.0 0.8083 21.1917
20.3834 0.0 0.8083 0.8083
0.0 18.7667 2.425 0.8083
6.7 5.3668 1.6166 8.3166
4.5585 1.6166 0.0 15.8249
9.9332 4.5585 1.6166 5.8916
9.3583 5.3668 4.8499 2.425
5.771 5.2541 10.5708 0.4042
|
| PPM | A C G T
0.1194 0.5683 0.1194 0.1929
0.378 0.1102 0.0735 0.4383
0.3544 0.1706 0.0972 0.3778
0.0367 0.0367 0.0735 0.853
0.0367 0.2439 0.6826 0.0367
0.0367 0.0367 0.0367 0.8898
0.0 0.0 0.0367 0.9633
0.0 0.0 0.0367 0.9633
0.9265 0.0 0.0367 0.0367
0.0 0.853 0.1102 0.0367
0.3045 0.2439 0.0735 0.378
0.2072 0.0735 0.0 0.7193
0.4515 0.2072 0.0735 0.2678
0.4254 0.2439 0.2205 0.1102
0.2623 0.2388 0.4805 0.0184
|
| PWM uniform | A C G T
-0.6125 0.7497 -0.6125 -0.2235
0.3709 -0.6738 -0.9652 0.507
0.3119 -0.3262 -0.768 0.3705
-1.3781 -1.3781 -0.9652 1.1362
-1.3781 -0.0215 0.9231 -1.3781
-1.3781 -1.3781 -1.3781 1.1768
-2.094 -2.094 -1.3781 1.2532
-2.094 -2.094 -1.3781 1.2532
1.2157 -2.094 -1.3781 -1.3781
-2.094 1.1362 -0.6738 -1.3781
0.175 -0.0215 -0.9652 0.3709
-0.1626 -0.9652 -2.094 0.973
0.5346 -0.1626 -0.9652 0.0606
0.4794 -0.0215 -0.1094 -0.6738
0.0423 -0.04 0.5924 -1.6733
|
| PWM hg19 | A C G T
-0.7298 0.9229 -0.4682 -0.3527
0.2303 -0.532 -0.8378 0.3647
0.1722 -0.1721 -0.6304 0.2299
-1.4542 -1.2804 -0.8378 0.9882
-1.4542 0.1403 1.0979 -1.4542
-1.4542 -1.2804 -1.2804 1.0284
-2.094 -2.094 -1.2804 1.1044
-2.094 -2.094 -1.2804 1.1044
1.0671 -2.094 -1.2804 -1.4542
-2.094 1.3126 -0.532 -1.4542
0.0375 0.1403 -0.8378 0.2303
-0.2933 -0.8378 -2.094 0.8261
0.3919 -0.0041 -0.8378 -0.0749
0.3374 0.1403 0.0504 -0.7888
-0.0928 0.1214 0.764 -1.7238
|