| UniProt |
FOXA1
|
| motif weight | 890.83129 |
| total sequences | 997 |
| data sources |
JASPAR:897 TRANSFAC20112:100 |
| motif logo |
|
| consensus | TGTTTRCWYWb |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
17.5642 2.1908 2.8528 868.2235
186.2475 4.9652 695.3154 4.3032
0.662 9.5869 2.6481 877.9342
0.662 4.6342 17.8648 867.6702
4.6342 1.3241 69.7966 815.0764
428.0568 8.1099 424.2325 30.4321
10.5712 732.1026 2.8136 145.3439
253.2293 116.5675 2.8136 518.2208
58.3465 323.1952 55.5818 453.7079
359.4583 9.9192 35.6982 485.7556
112.128 132.1657 421.6161 224.9215
|
| PPM | A C G T
0.0197 0.0025 0.0032 0.9746
0.2091 0.0056 0.7805 0.0048
0.0007 0.0108 0.003 0.9855
0.0007 0.0052 0.0201 0.974
0.0052 0.0015 0.0783 0.915
0.4805 0.0091 0.4762 0.0342
0.0119 0.8218 0.0032 0.1632
0.2843 0.1309 0.0032 0.5817
0.0655 0.3628 0.0624 0.5093
0.4035 0.0111 0.0401 0.5453
0.1259 0.1484 0.4733 0.2525
|
| PWM uniform | A C G T
-2.4553 -4.0554 -3.8981 1.3549
-0.1773 -3.5168 1.1333 -3.6215
-4.5548 -2.99 -3.9442 1.366
-4.5548 -3.5678 -2.4398 1.3543
-3.5678 -4.3075 -1.1438 1.2919
0.6498 -3.1303 0.6408 -1.9437
-2.9064 1.1848 -3.9068 -0.4227
0.1275 -0.6405 -3.9068 0.8402
-1.3184 0.37 -1.3655 0.7077
0.4759 -2.961 -1.7919 0.7757
-0.6788 -0.5166 0.6347 0.0098
|
| PWM hg19 | A C G T
-2.5953 -3.9482 -3.7795 1.2006
-0.3305 -3.3774 1.316 -3.7299
-4.5958 -2.8324 -3.8287 1.2117
-4.5958 -3.4307 -2.2714 1.2
-3.6786 -4.2232 -0.9648 1.1376
0.4958 -2.9766 0.8232 -2.0895
-3.0381 1.3674 -3.7888 -0.5755
-0.026 -0.4599 -3.7888 0.6861
-1.4683 0.5522 -1.1874 0.5537
0.322 -2.8027 -1.6165 0.6217
-0.831 -0.3357 0.817 -0.1436
|