| UniProt |
EGR1
|
| motif weight | 1887.02469 |
| total sequences | 2227 |
| data sources |
HUDSONALPHACHIPSEQV2:2000 JASPAR:15 TRANSFAC20112:212 |
| motif logo |
|
| consensus | nGCGKGGGYGK |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
285.8968 355.7788 600.9352 644.4139
83.0346 113.6917 1665.808 24.4903
113.1851 1562.9855 35.147 175.7071
6.8286 1.868 1874.8499 3.4782
17.5113 25.2522 925.9635 918.2976
143.2156 36.4498 1702.3855 4.9739
48.106 124.169 1700.411 14.3387
22.5254 19.3896 1845.1097 0.0
168.1491 1412.3175 13.1087 293.4494
40.7818 13.6789 1803.3377 29.2263
170.947 122.4045 1150.2158 443.4574
|
| PPM | A C G T
0.1515 0.1885 0.3185 0.3415
0.044 0.0602 0.8828 0.013
0.06 0.8283 0.0186 0.0931
0.0036 0.001 0.9935 0.0018
0.0093 0.0134 0.4907 0.4866
0.0759 0.0193 0.9022 0.0026
0.0255 0.0658 0.9011 0.0076
0.0119 0.0103 0.9778 0.0
0.0891 0.7484 0.0069 0.1555
0.0216 0.0072 0.9557 0.0155
0.0906 0.0649 0.6095 0.235
|
| PWM uniform | A C G T
-0.4982 -0.2809 0.2412 0.3108
-1.7187 -1.4105 1.2587 -2.888
-1.4149 1.1951 -2.5487 -0.981
-3.9955 -4.8377 1.3768 -4.4808
-3.1953 -2.8595 0.6724 0.6641
-1.183 -2.5141 1.2804 -4.2348
-2.2486 -1.3237 1.2793 -3.3739
-2.9654 -3.1029 1.3609 -5.5262
-1.0244 1.0939 -3.4528 -0.4723
-2.407 -3.4155 1.338 -2.7229
-1.0081 -1.3378 0.8889 -0.0616
|
| PWM hg19 | A C G T
-0.6518 -0.0987 0.4237 0.1566
-1.8697 -1.2302 1.4416 -3.0308
-1.5668 1.3779 -2.3742 -1.1338
-4.1146 -4.7424 1.5597 -4.5783
-3.3339 -2.6882 0.8551 0.5098
-1.3355 -2.3393 1.4633 -4.3445
-2.397 -1.1432 1.4621 -3.5093
-3.1072 -2.9348 1.5437 -5.5262
-1.1773 1.2767 -3.291 -0.6259
-2.5543 -3.2529 1.5208 -2.8674
-1.161 -1.1573 1.0717 -0.2156
|