| UniProt |
CTCF
|
| motif weight | 2861.30794 |
| total sequences | 2990 |
| data sources |
HUDSONALPHACHIPSEQV2:2000 JASPAR:913 TRANSFAC20112:77 |
| motif logo |
|
| consensus | bddCCRSbAGRKGGCRShv |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
280.5564 890.0926 420.4217 1270.2372
464.4797 464.4744 1268.3184 664.0355
687.9014 231.0498 1529.2976 413.0591
170.7052 2433.9465 115.1601 141.4961
23.5312 2748.7919 34.5843 54.4006
1923.8531 92.7429 537.74 306.972
115.8074 1677.9044 1024.6909 42.9053
354.7811 1303.7857 385.162 817.5791
2387.2992 177.0913 143.1511 153.7664
8.1227 11.0723 2802.1589 39.954
967.0799 16.4597 1866.2867 11.4816
157.8771 107.6865 1625.552 970.1924
38.6914 0.5948 2787.9773 34.0445
118.1712 62.7868 2511.8251 168.5248
296.4752 2357.2406 41.0391 166.553
1290.0135 41.5171 1475.3327 54.4446
178.4356 1445.8639 1130.0211 106.9873
399.2443 1002.3805 311.6378 1148.0454
1132.0681 693.1418 889.0964 147.0016
|
| PPM | A C G T
0.0981 0.3111 0.1469 0.4439
0.1623 0.1623 0.4433 0.2321
0.2404 0.0807 0.5345 0.1444
0.0597 0.8506 0.0402 0.0495
0.0082 0.9607 0.0121 0.019
0.6724 0.0324 0.1879 0.1073
0.0405 0.5864 0.3581 0.015
0.124 0.4557 0.1346 0.2857
0.8343 0.0619 0.05 0.0537
0.0028 0.0039 0.9793 0.014
0.338 0.0058 0.6522 0.004
0.0552 0.0376 0.5681 0.3391
0.0135 0.0002 0.9744 0.0119
0.0413 0.0219 0.8779 0.0589
0.1036 0.8238 0.0143 0.0582
0.4508 0.0145 0.5156 0.019
0.0624 0.5053 0.3949 0.0374
0.1395 0.3503 0.1089 0.4012
0.3956 0.2422 0.3107 0.0514
|
| PWM uniform | A C G T
-0.9317 0.218 -0.5295 0.573
-0.4303 -0.4303 0.5715 -0.0742
-0.039 -1.1243 0.7583 -0.5471
-1.424 1.2226 -1.8121 -1.6093
-3.336 1.3441 -2.9762 -2.5432
0.9876 -2.0245 -0.2844 -0.8423
-1.8066 0.851 0.3586 -2.7712
-0.6984 0.599 -0.6167 0.1333
1.2032 -1.3877 -1.5978 -1.5272
-4.2617 -4.0058 1.3633 -2.8392
0.3008 -3.6605 0.9573 -3.975
-1.5012 -1.878 0.8193 0.304
-2.8698 -5.626 1.3583 -2.991
-1.7867 -2.4046 1.254 -1.4367
-0.8769 1.1906 -2.8136 -1.4483
0.5884 -2.8026 0.7225 -2.5424
-1.3802 0.7023 0.4562 -1.8844
-0.581 0.3366 -0.8273 0.472
0.458 -0.0314 0.2169 -1.5716
|
| PWM hg19 | A C G T
-1.0852 0.4007 -0.3473 0.4186
-0.5843 -0.248 0.7543 -0.2284
-0.1932 -0.9427 0.9412 -0.701
-1.5767 1.4055 -1.6319 -1.7616
-3.4777 1.527 -2.8023 -2.692
0.8331 -1.8449 -0.102 -0.9959
-1.9584 1.0338 0.5413 -2.9185
-0.8522 0.7818 -0.4345 -0.021
1.0487 -1.2065 -1.4171 -1.6798
-4.384 -3.8486 1.5463 -2.9859
0.1465 -3.4956 1.1401 -4.1052
-1.6538 -1.698 1.0021 0.1497
-3.0163 -5.5808 1.5412 -3.1365
-1.9386 -2.2267 1.4369 -1.5894
-1.0304 1.3735 -2.6384 -1.601
0.434 -2.6272 0.9053 -2.6912
-1.533 0.8851 0.639 -2.036
-0.7348 0.5193 -0.6453 0.3177
0.3037 0.1511 0.3996 -1.7241
|