back BRCA1_f1 HOCOMOCO-build9-MAR2012

UniProt	BRCA1
motif weight	72.57041
total sequences	96
data sources	JASPAR:43 TRANSFAC20112:53
motif logo
consensus	bKKbKGTTG
small-BiSMark	hg19 PWM
small-BiSMark	uniform PWM
thresholds	hg19 PWM
thresholds	uniform PWM
WPCM	A C G T 10.4529 14.3109 21.0795 26.727 13.7504 0.0 19.9927 38.8274 2.0343 9.0845 11.1187 50.333 4.0685 25.0086 34.9694 8.5239 2.0343 10.874 32.7246 26.9376 0.0 0.0 63.1702 9.4003 0.0 2.0343 0.0 70.5361 0.0 0.0 0.0 72.5704 4.5771 5.314 60.1365 2.5428
PPM	A C G T 0.144 0.1972 0.2905 0.3683 0.1895 0.0 0.2755 0.535 0.028 0.1252 0.1532 0.6936 0.0561 0.3446 0.4819 0.1175 0.028 0.1498 0.4509 0.3712 0.0 0.0 0.8705 0.1295 0.0 0.028 0.0 0.972 0.0 0.0 0.0 1.0 0.0631 0.0732 0.8287 0.035
PWM uniform	A C G T -0.5112 -0.2224 0.1422 0.3693 -0.2595 -2.8869 0.0919 0.7307 -1.8225 -0.6376 -0.455 0.9841 -1.3186 0.3055 0.629 -0.6944 -1.8225 -0.4753 0.5647 0.3769 -2.8869 -2.8869 1.207 -0.607 -2.8869 -1.8225 -2.8869 1.3156 -2.8869 -2.8869 -2.8869 1.3436 -1.2243 -1.1017 1.1586 -1.6708
PWM hg19	A C G T -0.6504 -0.0511 0.3172 0.2211 -0.4022 -2.8869 0.2664 0.5805 -1.9211 -0.4724 -0.2868 0.8329 -1.439 0.4817 0.8071 -0.8305 -1.9211 -0.3074 0.7424 0.2286 -2.8869 -2.8869 1.3873 -0.7447 -2.8869 -1.6989 -2.8869 1.1634 -2.8869 -2.8869 -2.8869 1.1914 -1.3477 -0.9471 1.3388 -1.7771