| UniProt |
BRAC
|
| motif weight | 26.0 |
| total sequences | 40 |
| data sources |
JASPAR:40
|
| motif logo |
|
| consensus | vSAWARTSACACCTAGGTGTSAAAW |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
12.75 2.75 8.75 1.75
4.0 13.0 8.0 1.0
21.0 1.0 1.0 3.0
9.0 1.0 1.0 15.0
15.0 0.0 0.0 11.0
8.0 0.0 17.0 1.0
0.0 0.0 0.0 26.0
3.0 5.0 18.0 0.0
26.0 0.0 0.0 0.0
0.0 26.0 0.0 0.0
26.0 0.0 0.0 0.0
0.0 25.0 0.0 1.0
0.0 24.0 1.0 1.0
0.0 0.0 0.0 26.0
26.0 0.0 0.0 0.0
0.0 2.0 24.0 0.0
0.0 1.0 25.0 0.0
0.0 1.0 0.0 25.0
0.0 0.0 26.0 0.0
1.0 1.0 0.0 24.0
0.0 7.0 17.0 2.0
25.0 0.0 0.0 1.0
22.0 2.0 1.0 1.0
22.0 0.0 3.0 1.0
6.5 2.5 2.5 14.5
|
| PPM | A C G T
0.4904 0.1058 0.3365 0.0673
0.1538 0.5 0.3077 0.0385
0.8077 0.0385 0.0385 0.1154
0.3462 0.0385 0.0385 0.5769
0.5769 0.0 0.0 0.4231
0.3077 0.0 0.6538 0.0385
0.0 0.0 0.0 1.0
0.1154 0.1923 0.6923 0.0
1.0 0.0 0.0 0.0
0.0 1.0 0.0 0.0
1.0 0.0 0.0 0.0
0.0 0.9615 0.0 0.0385
0.0 0.9231 0.0385 0.0385
0.0 0.0 0.0 1.0
1.0 0.0 0.0 0.0
0.0 0.0769 0.9231 0.0
0.0 0.0385 0.9615 0.0
0.0 0.0385 0.0 0.9615
0.0 0.0 1.0 0.0
0.0385 0.0385 0.0 0.9231
0.0 0.2692 0.6538 0.0769
0.9615 0.0 0.0 0.0385
0.8462 0.0769 0.0385 0.0385
0.8462 0.0 0.1154 0.0385
0.25 0.0962 0.0962 0.5577
|
| PWM uniform | A C G T
0.6176 -0.7188 0.2682 -1.0481
-0.4182 0.6359 0.1865 -1.394
1.0927 -1.394 -1.394 -0.651
0.294 -1.394 -1.394 0.7711
0.7711 -2.195 -2.195 0.4795
0.1865 -2.195 0.8902 -1.394
-2.195 -2.195 -2.195 1.2991
-0.651 -0.2295 0.9448 -2.195
1.2991 -2.195 -2.195 -2.195
-2.195 1.2991 -2.195 -2.195
1.2991 -2.195 -2.195 -2.195
-2.195 1.2611 -2.195 -1.394
-2.195 1.2216 -1.394 -1.394
-2.195 -2.195 -2.195 1.2991
1.2991 -2.195 -2.195 -2.195
-2.195 -0.9551 1.2216 -2.195
-2.195 -1.394 1.2611 -2.195
-2.195 -1.394 -2.195 1.2611
-2.195 -2.195 1.2991 -2.195
-1.394 -1.394 -2.195 1.2216
-2.195 0.0661 0.8902 -0.9551
1.2611 -2.195 -2.195 -1.394
1.1375 -0.9551 -1.394 -1.394
1.1375 -2.195 -0.651 -1.394
0.0 -0.7915 -0.7915 0.7389
|
| PWM hg19 | A C G T
0.4729 -0.5748 0.4369 -1.151
-0.545 0.809 0.354 -1.4763
0.9443 -1.2891 -1.2891 -0.7706
0.1531 -1.2891 -1.2891 0.625
0.625 -2.195 -2.195 0.3363
0.0472 -2.195 1.0655 -1.4763
-2.195 -2.195 -2.195 1.1495
-0.7706 -0.0702 1.1205 -2.195
1.1495 -2.195 -2.195 -2.195
-2.195 1.477 -2.195 -2.195
1.1495 -2.195 -2.195 -2.195
-2.195 1.4388 -2.195 -1.4763
-2.195 1.3991 -1.2891 -1.4763
-2.195 -2.195 -2.195 1.1495
1.1495 -2.195 -2.195 -2.195
-2.195 -0.8216 1.3991 -2.195
-2.195 -1.2891 1.4388 -2.195
-2.195 -1.2891 -2.195 1.1117
-2.195 -2.195 1.477 -2.195
-1.4763 -1.2891 -2.195 1.0724
-2.195 0.2316 1.0655 -1.0625
1.1117 -2.195 -2.195 -1.4763
0.9888 -0.8216 -1.2891 -1.4763
0.9888 -2.195 -0.5044 -1.4763
-0.1362 -0.6505 -0.6505 0.5931
|
