back BHE40_f2 HOCOMOCO-build9-MAR2012


UniProt BHE40
motif weight2037.0
total sequences2037
data sources HUDSONALPHACHIPSEQV2:2000
TRANSFAC20112:37
motif logo
consensusKCACGTGMb
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
  223.5763    11.2973  1199.8272   602.2993 
  168.7042   1865.632     1.3599     1.3039 
  1995.392     41.608        0.0        0.0 
    3.2451  1923.1678    68.4167    42.1704 
  102.4526     4.1885  1927.2574     3.1016 
   91.9485    54.8835    23.7994  1866.3686 
       0.0        0.0     2037.0        0.0 
 1397.7152   302.6628   173.1733   163.4488 
  152.0255  1040.8097   616.3441   227.8208 
PPM
     A          C          G          T    
    0.1098     0.0055      0.589     0.2957 
    0.0828     0.9159     0.0007     0.0006 
    0.9796     0.0204        0.0        0.0 
    0.0016     0.9441     0.0336     0.0207 
    0.0503     0.0021     0.9461     0.0015 
    0.0451     0.0269     0.0117     0.9162 
       0.0        0.0        1.0        0.0 
    0.6862     0.1486      0.085     0.0802 
    0.0746      0.511     0.3026     0.1118 
PWM uniform
     A          C          G          T    
   -0.8184    -3.6563     0.8548     0.1672 
   -1.0973     1.2957    -5.0535    -5.0708 
    1.3629    -2.4636    -5.5923    -5.5923 
   -4.5977      1.326    -1.9836    -2.4508 
   -1.5889    -4.4295     1.3282     -4.626 
   -1.6949    -2.1973      -2.99     1.2961 
   -5.5923    -5.5923     1.3835    -5.5923 
    1.0073    -0.5178    -1.0714    -1.1286 
   -1.2002     0.7129     0.1902    -0.7998 
PWM hg19
     A          C          G          T    
   -0.9717    -3.4977     1.0376     0.0131 
   -1.2501     1.4786    -4.9731    -5.1308 
    1.2084    -2.2879    -5.5923    -5.5923 
   -4.6923     1.5089    -1.8051    -2.5982 
   -1.7405    -4.3001      1.511    -4.7189 
   -1.8462    -2.0199    -2.8195     1.1416 
   -5.5923    -5.5923     1.5664    -5.5923 
    0.8529    -0.3358    -0.8902    -1.2813 
   -1.3528     0.8956     0.3727    -0.9531