| UniProt |
BATF
|
| motif weight | 1878.10887 |
| total sequences | 2000 |
| data sources |
HUDSONALPHACHIPSEQV2:2000
|
| motif logo |
|
| consensus | vTGAGTCAbh |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
773.1252 570.7676 269.2439 264.9722
92.3355 0.0 19.4489 1766.3244
0.0 65.1337 1639.2384 173.7367
1799.3827 0.0 6.7545 71.9717
0.0 0.0 1760.4663 117.6426
0.9961 20.7238 65.9518 1790.4372
165.4578 1707.9183 4.7327 0.0
1865.2126 0.0 0.0 12.8962
231.0298 266.7026 491.8533 888.5231
727.7334 355.9676 174.4041 620.0038
|
| PPM | A C G T
0.4117 0.3039 0.1434 0.1411
0.0492 0.0 0.0104 0.9405
0.0 0.0347 0.8728 0.0925
0.9581 0.0 0.0036 0.0383
0.0 0.0 0.9374 0.0626
0.0005 0.011 0.0351 0.9533
0.0881 0.9094 0.0025 0.0
0.9931 0.0 0.0 0.0069
0.123 0.142 0.2619 0.4731
0.3875 0.1895 0.0929 0.3301
|
| PWM uniform | A C G T
0.4971 0.1945 -0.5531 -0.569
-1.6101 -5.5221 -3.0955 1.322
-5.5221 -1.9508 1.2474 -0.9874
1.3405 -5.5221 -3.9994 -1.8536
-5.5221 -5.5221 1.3187 -1.3722
-5.0977 -3.0374 -1.9386 1.3355
-1.0357 1.2884 -4.2661 -5.5221
1.3764 -5.5221 -5.5221 -3.4624
-0.7051 -0.5626 0.0463 0.6359
0.4368 -0.2756 -0.9836 0.277
|
| PWM hg19 | A C G T
0.3429 0.377 -0.3713 -0.7225
-1.7614 -5.5221 -2.9273 1.1675
-5.5221 -1.7724 1.4302 -1.1403
1.186 -5.5221 -3.8536 -2.004
-5.5221 -5.5221 1.5015 -1.5242
-5.1486 -2.8684 -1.7603 1.1811
-1.1885 1.4713 -4.1318 -5.5221
1.2219 -5.5221 -5.5221 -3.596
-0.8584 -0.3807 0.2287 0.4816
0.2826 -0.0935 -0.8024 0.1229
|
