Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif VVL comparison [dmmpmm_compare_html]

motif alignment

Bigfoot
Down
Pollard
SeSiMCMC

motif similarity

Bigfoot Pollard Down SeSiMCMC
Bigfoot 1.0 0.605 0.1743 0.2153
Pollard 0.605 1.0 0.2213 0.1473
Down 0.1743 0.2213 1.0 0.1721
SeSiMCMC 0.2153 0.1473 0.1721 1.0