Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif TTK comparison [dmmpmm_compare_html]

motif alignment Bigfoot Noyes Papatsenko Pollard SeSiMCMC motif similarity Bigfoot Pollard SeSiMCMC Papatsenko Noyes Bigfoot 1.0 0.2965 0.4365 0.4382 0.1388 Pollard 0.2965 1.0 0.5217 0.3991 0.1529 SeSiMCMC 0.4365 0.5217 1.0 0.674 0.1297 Papatsenko 0.4382 0.3991 0.674 1.0 0.1314 Noyes 0.1388 0.1529 0.1297 0.1314 1.0