Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.
<up> DMMPMM motif TTK comparison [dmmpmm_compare_html]
![](TTK/TTK_comparison.png) |
motif alignment
motif similarity
|
Bigfoot |
Pollard |
SeSiMCMC |
Papatsenko |
Noyes |
Bigfoot |
1.0 |
0.2965 |
0.4365 |
0.4382 |
0.1388 |
Pollard |
0.2965 |
1.0 |
0.5217 |
0.3991 |
0.1529 |
SeSiMCMC |
0.4365 |
0.5217 |
1.0 |
0.674 |
0.1297 |
Papatsenko |
0.4382 |
0.3991 |
0.674 |
1.0 |
0.1314 |
Noyes |
0.1388 |
0.1529 |
0.1297 |
0.1314 |
1.0 |
|