Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif SD comparison [dmmpmm_compare_html]

motif alignment

Bigfoot
Bergman
Pollard
SeSiMCMC

motif similarity

Bigfoot Pollard Bergman SeSiMCMC
Bigfoot 1.0 0.0589 0.0509 0.7745
Pollard 0.0589 1.0 0.1234 0.0639
Bergman 0.0509 0.1234 1.0 0.0503
SeSiMCMC 0.7745 0.0639 0.0503 1.0