Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif PRD comparison [dmmpmm_compare_html]

motif alignment Bigfoot Down Noyes Papatsenko Pollard SeSiMCMC motif similarity Bigfoot Pollard Down SeSiMCMC Papatsenko Noyes Bigfoot 1.0 0.0414 0.0278 0.2728 0.0558 0.0309 Pollard 0.0414 1.0 0.0405 0.132 0.0993 0.0498 Down 0.0278 0.0405 1.0 0.0284 0.0378 0.0426 SeSiMCMC 0.2728 0.132 0.0284 1.0 0.0874 0.0291 Papatsenko 0.0558 0.0993 0.0378 0.0874 1.0 0.0296 Noyes 0.0309 0.0498 0.0426 0.0291 0.0296 1.0