Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif PAN comparison [dmmpmm_compare_html]

motif alignment Bigfoot Bergman Down Papatsenko Pollard SeSiMCMC motif similarity Bigfoot Pollard Down Bergman SeSiMCMC Papatsenko Bigfoot 1.0 0.511 0.1293 0.1173 0.6236 0.4794 Pollard 0.511 1.0 0.0787 0.1994 0.7774 0.4219 Down 0.1293 0.0787 1.0 0.0694 0.1074 0.0897 Bergman 0.1173 0.1994 0.0694 1.0 0.1873 0.1768 SeSiMCMC 0.6236 0.7774 0.1074 0.1873 1.0 0.4769 Papatsenko 0.4794 0.4219 0.0897 0.1768 0.4769 1.0