Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif KR comparison [dmmpmm_compare_html]

motif alignment Bigfoot Bergman Down Noyes Papatsenko Pollard SeSiMCMC motif similarity Bigfoot Pollard Down Bergman SeSiMCMC Papatsenko Noyes Bigfoot 1.0 0.5386 0.6715 0.321 0.7935 0.4566 0.4386 Pollard 0.5386 1.0 0.4484 0.3902 0.5616 0.4792 0.4587 Down 0.6715 0.4484 1.0 0.2835 0.6109 0.4186 0.4488 Bergman 0.321 0.3902 0.2835 1.0 0.3333 0.263 0.2445 SeSiMCMC 0.7935 0.5616 0.6109 0.3333 1.0 0.4559 0.4445 Papatsenko 0.4566 0.4792 0.4186 0.263 0.4559 1.0 0.3791 Noyes 0.4386 0.4587 0.4488 0.2445 0.4445 0.3791 1.0