Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif KNI comparison [dmmpmm_compare_html]

motif alignment Bigfoot Down Noyes Papatsenko Pollard SeSiMCMC motif similarity Bigfoot Pollard Down SeSiMCMC Papatsenko Noyes Bigfoot 1.0 0.2 0.052 0.7721 0.0588 0.2434 Pollard 0.2 1.0 0.0227 0.1732 0.0398 0.1469 Down 0.052 0.0227 1.0 0.0487 0.1199 0.0325 SeSiMCMC 0.7721 0.1732 0.0487 1.0 0.0517 0.2341 Papatsenko 0.0588 0.0398 0.1199 0.0517 1.0 0.0392 Noyes 0.2434 0.1469 0.0325 0.2341 0.0392 1.0