Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif DL comparison [dmmpmm_compare_html]

motif alignment Bigfoot Bergman Down Noyes Papatsenko Pollard SeSiMCMC motif similarity Bigfoot Pollard Down Bergman SeSiMCMC Papatsenko Noyes Bigfoot 1.0 0.3913 0.3124 0.2659 0.9566 0.3747 0.3158 Pollard 0.3913 1.0 0.4562 0.3381 0.3977 0.4415 0.4317 Down 0.3124 0.4562 1.0 0.2963 0.3106 0.3935 0.3208 Bergman 0.2659 0.3381 0.2963 1.0 0.2681 0.3575 0.3606 SeSiMCMC 0.9566 0.3977 0.3106 0.2681 1.0 0.3834 0.3206 Papatsenko 0.3747 0.4415 0.3935 0.3575 0.3834 1.0 0.4437 Noyes 0.3158 0.4317 0.3208 0.3606 0.3206 0.4437 1.0