Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif BR_Z4 comparison [dmmpmm_compare_html]

motif alignment

Bigfoot
Bergman
Pollard
SeSiMCMC

motif similarity

Bigfoot Pollard Bergman SeSiMCMC
Bigfoot 1.0 0.254 0.054 0.2612
Pollard 0.254 1.0 0.0099 0.2487
Bergman 0.054 0.0099 1.0 0.0362
SeSiMCMC 0.2612 0.2487 0.0362 1.0